This page was generated from testing/benchmarking/automated-benchmark/README.ipynb.
Benchmarking with Argo Worfklows & Vegeta¶
In this notebook we will dive into how you can run bench marking with batch processing with Argo Workflows, Seldon Core and Vegeta.
Dependencies:
Seldon core installed as per the docs with Istio as an ingress
Argo Workfklows installed in cluster (and argo CLI for commands)
Setup¶
Install Seldon Core¶
Use the notebook to set-up Seldon Core with Ambassador or Istio Ingress.
Note: If running with KIND you need to make sure do follow these steps as workaround to the /.../docker.sock known issue.
Install Argo Workflows¶
You can follow the instructions from the official Argo Workflows Documentation.
Download the right CLi for your environment following the documentation (https://github.com/argoproj/argo-workflows/releases/tag/v3.0.8)
You also need to make sure that argo has permissions to create seldon deployments - for this you can just create a default-admin rolebinding as follows:
Set up the RBAC so the argo workflow is able to create seldon deployments.
Set up the configmap in order for it to work in KIND and other environments where Docker may not be thr main runtime (see https://github.com/argoproj/argo-workflows/issues/5243#issuecomment-792993742)
Create Benchmark Argo Workflow¶
In order to create a benchmark, we created a simple argo workflow template so you can leverage the power of the helm charts.
Before we dive into the contents of the full helm chart, let’s first give it a try with some of the settings.
We will run a batch job that will set up a Seldon Deployment with 1 replicas and 4 cpus (with 100 max workers) to send requests.
[7]:
!helm template seldon-benchmark-workflow ../../../helm-charts/seldon-benchmark-workflow/ \
--set workflow.namespace=argo \
--set workflow.name=seldon-benchmark-process \
--set workflow.parallelism=2 \
--set seldonDeployment.name=sklearn \
--set seldonDeployment.replicas="1" \
--set seldonDeployment.serverWorkers="5" \
--set seldonDeployment.serverThreads=1 \
--set seldonDeployment.modelUri="gs://seldon-models/v1.17.0-dev/sklearn/iris" \
--set seldonDeployment.server="SKLEARN_SERVER" \
--set seldonDeployment.apiType="rest|grpc" \
--set seldonDeployment.requests.cpu="2000Mi" \
--set seldonDeployment.limits.cpu="2000Mi" \
--set seldonDeployment.disableOrchestrator="true|false" \
--set benchmark.cpu="2" \
--set benchmark.concurrency="1" \
--set benchmark.duration="30s" \
--set benchmark.rate=0 \
--set benchmark.data='\{"data": {"ndarray": [[0\,1\,2\,3]]\}\}' \
| argo submit -
Name: seldon-benchmark-process
Namespace: argo
ServiceAccount: default
Status: Pending
Created: Mon Jun 28 18:38:12 +0100 (now)
Progress:
[7]:
!argo list -n argo
NAME STATUS AGE DURATION PRIORITY
seldon-benchmark-process Running 20s 20s 0
[8]:
!argo logs -f seldon-benchmark-process -n argo
seldon-benchmark-process-635956972: [{"name": "sklearn-0", "replicas": "1", "serverWorkers": "5", "serverThreads": "1", "modelUri": "gs://seldon-models/sklearn/iris", "image": "", "server": "SKLEARN_SERVER", "apiType": "rest", "requestsCpu": "2000Mi", "requestsMemory": "100Mi", "limitsCpu": "2000Mi", "limitsMemory": "1000Mi", "benchmarkCpu": "2", "concurrency": "1", "duration": "30s", "rate": "0", "disableOrchestrator": "true", "params": "{\"name\": \"sklearn-0\", \"replicas\": \"1\", \"serverWorkers\": \"5\", \"serverThreads\": \"1\", \"modelUri\": \"gs://seldon-models/sklearn/iris\", \"image\": \"\", \"server\": \"SKLEARN_SERVER\", \"apiType\": \"rest\", \"requestsCpu\": \"2000Mi\", \"requestsMemory\": \"100Mi\", \"limitsCpu\": \"2000Mi\", \"limitsMemory\": \"1000Mi\", \"benchmarkCpu\": \"2\", \"concurrency\": \"1\", \"duration\": \"30s\", \"rate\": \"0\", \"disableOrchestrator\": \"true\"}"}]
seldon-benchmark-process-2323867814: time="2021-06-28T17:27:52.287Z" level=info msg="Starting Workflow Executor" version="{v3.0.3 2021-05-11T21:14:20Z 02071057c082cf295ab8da68f1b2027ff8762b5a v3.0.3 clean go1.15.7 gc linux/amd64}"
seldon-benchmark-process-2323867814: time="2021-06-28T17:27:52.289Z" level=info msg="Creating a docker executor"
seldon-benchmark-process-2323867814: time="2021-06-28T17:27:52.289Z" level=info msg="Executor (version: v3.0.3, build_date: 2021-05-11T21:14:20Z) initialized (pod: argo/seldon-benchmark-process-2323867814) with template:\n{\"name\":\"create-seldon-resource-template\",\"inputs\":{\"parameters\":[{\"name\":\"inparam\",\"value\":\"sklearn-0\"},{\"name\":\"replicas\",\"value\":\"1\"},{\"name\":\"serverWorkers\",\"value\":\"5\"},{\"name\":\"serverThreads\",\"value\":\"1\"},{\"name\":\"modelUri\",\"value\":\"gs://seldon-models/sklearn/iris\"},{\"name\":\"image\",\"value\":\"\"},{\"name\":\"server\",\"value\":\"SKLEARN_SERVER\"},{\"name\":\"apiType\",\"value\":\"rest\"},{\"name\":\"requestsCpu\",\"value\":\"2000Mi\"},{\"name\":\"requestsMemory\",\"value\":\"100Mi\"},{\"name\":\"limitsCpu\",\"value\":\"2000Mi\"},{\"name\":\"limitsMemory\",\"value\":\"1000Mi\"},{\"name\":\"benchmarkCpu\",\"value\":\"2\"},{\"name\":\"concurrency\",\"value\":\"1\"},{\"name\":\"duration\",\"value\":\"30s\"},{\"name\":\"rate\",\"value\":\"0\"},{\"name\":\"params\",\"value\":\"{\\\\\\\"name\\\\\\\": \\\\\\\"sklearn-0\\\\\\\", \\\\\\\"replicas\\\\\\\": \\\\\\\"1\\\\\\\", \\\\\\\"serverWorkers\\\\\\\": \\\\\\\"5\\\\\\\", \\\\\\\"serverThreads\\\\\\\": \\\\\\\"1\\\\\\\", \\\\\\\"modelUri\\\\\\\": \\\\\\\"gs://seldon-models/sklearn/iris\\\\\\\", \\\\\\\"image\\\\\\\": \\\\\\\"\\\\\\\", \\\\\\\"server\\\\\\\": \\\\\\\"SKLEARN_SERVER\\\\\\\", \\\\\\\"apiType\\\\\\\": \\\\\\\"rest\\\\\\\", \\\\\\\"requestsCpu\\\\\\\": \\\\\\\"2000Mi\\\\\\\", \\\\\\\"requestsMemory\\\\\\\": \\\\\\\"100Mi\\\\\\\", \\\\\\\"limitsCpu\\\\\\\": \\\\\\\"2000Mi\\\\\\\", \\\\\\\"limitsMemory\\\\\\\": \\\\\\\"1000Mi\\\\\\\", \\\\\\\"benchmarkCpu\\\\\\\": \\\\\\\"2\\\\\\\", \\\\\\\"concurrency\\\\\\\": \\\\\\\"1\\\\\\\", \\\\\\\"duration\\\\\\\": \\\\\\\"30s\\\\\\\", \\\\\\\"rate\\\\\\\": \\\\\\\"0\\\\\\\", \\\\\\\"disableOrchestrator\\\\\\\": \\\\\\\"true\\\\\\\"}\"},{\"name\":\"disableOrchestrator\",\"value\":\"true\"}]},\"outputs\":{},\"metadata\":{},\"resource\":{\"action\":\"create\",\"manifest\":\"apiVersion: machinelearning.seldon.io/v1\\nkind: SeldonDeployment\\nmetadata:\\n name: \\\"sklearn-0\\\"\\n namespace: argo\\n ownerReferences:\\n - apiVersion: argoproj.io/v1alpha1\\n blockOwnerDeletion: true\\n kind: Workflow\\n name: \\\"seldon-benchmark-process\\\"\\n uid: \\\"8be89da7-cb46-40c5-98ac-c17dd9d99d12\\\"\\nspec:\\n name: \\\"sklearn-0\\\"\\n transport: \\\"rest\\\"\\n predictors:\\n - annotations:\\n seldonio/no-engine: \\\"true\\\"\\n componentSpecs:\\n - spec:\\n containers:\\n - name: classifier\\n env:\\n - name: GUNICORN_THREADS\\n value: \\\"1\\\"\\n - name: GUNICORN_WORKERS\\n value: \\\"5\\\"\\n graph:\\n children: []\\n implementation: SKLEARN_SERVER\\n modelUri: gs://seldon-models/sklearn/iris\\n name: classifier\\n name: default\\n replicas: 1\\n\"}}"
seldon-benchmark-process-2323867814: time="2021-06-28T17:27:52.289Z" level=info msg="Loading manifest to /tmp/manifest.yaml"
seldon-benchmark-process-2323867814: time="2021-06-28T17:27:52.289Z" level=info msg="kubectl create -f /tmp/manifest.yaml -o json"
seldon-benchmark-process-2323867814: time="2021-06-28T17:27:52.808Z" level=info msg=argo/SeldonDeployment.machinelearning.seldon.io/sklearn-0
seldon-benchmark-process-2323867814: time="2021-06-28T17:27:52.808Z" level=info msg="Starting SIGUSR2 signal monitor"
seldon-benchmark-process-2323867814: time="2021-06-28T17:27:52.808Z" level=info msg="No output parameters"
seldon-benchmark-process-2388065488: Waiting for deployment "sklearn-0-default-0-classifier" rollout to finish: 0 of 1 updated replicas are available...
seldon-benchmark-process-2388065488: deployment "sklearn-0-default-0-classifier" successfully rolled out
seldon-benchmark-process-3406592537: {"latencies":{"total":29976397800,"mean":4636720,"50th":4085862,"90th":6830905,"95th":7974040,"99th":12617402,"max":37090400,"min":2523500},"bytes_in":{"total":1183095,"mean":183},"bytes_out":{"total":219810,"mean":34},"earliest":"2021-06-28T17:28:30.4200499Z","latest":"2021-06-28T17:29:00.4217614Z","end":"2021-06-28T17:29:00.4249416Z","duration":30001711500,"wait":3180200,"requests":6465,"rate":215.48770642634838,"throughput":215.46486701700042,"success":1,"status_codes":{"200":6465},"errors":[],"params":{"name":"sklearn-0","replicas":"1","serverWorkers":"5","serverThreads":"1","modelUri":"gs://seldon-models/sklearn/iris","image":"","server":"SKLEARN_SERVER","apiType":"rest","requestsCpu":"2000Mi","requestsMemory":"100Mi","limitsCpu":"2000Mi","limitsMemory":"1000Mi","benchmarkCpu":"2","concurrency":"1","duration":"30s","rate":"0","disableOrchestrator":"true"}}
seldon-benchmark-process-1122797932: seldondeployment.machinelearning.seldon.io "sklearn-0" deleted
[14]:
!argo get seldon-benchmark-process -n argo
Name: seldon-benchmark-process
Namespace: argo
ServiceAccount: default
Status: Running
Conditions:
PodRunning False
Created: Mon Jun 28 18:38:12 +0100 (4 minutes ago)
Started: Mon Jun 28 18:38:12 +0100 (4 minutes ago)
Duration: 4 minutes 53 seconds
Progress: 14/15
ResourcesDuration: 4m41s*(1 cpu),4m41s*(100Mi memory)
STEP TEMPLATE PODNAME DURATION MESSAGE
● seldon-benchmark-process seldon-benchmark-process
├───✔ generate-parameters generate-parameters-template seldon-benchmark-process-635956972 3s
└─┬─✔ run-benchmark-iteration(0:apiType:rest,benchmarkCpu:2,concurrency:1,disableOrchestrator:true,duration:30s,image:,limitsCpu:2000Mi,limitsMemory:1000Mi,modelUri:gs://seldon-models/sklearn/iris,name:sklearn-0,params:{\"name\": \"sklearn-0\", \"replicas\": \"1\", \"serverWorkers\": \"5\", \"serverThreads\": \"1\", \"modelUri\": \"gs://seldon-models/sklearn/iris\", \"image\": \"\", \"server\": \"SKLEARN_SERVER\", \"apiType\": \"rest\", \"requestsCpu\": \"2000Mi\", \"requestsMemory\": \"100Mi\", \"limitsCpu\": \"2000Mi\", \"limitsMemory\": \"1000Mi\", \"benchmarkCpu\": \"2\", \"concurrency\": \"1\", \"duration\": \"30s\", \"rate\": \"0\", \"disableOrchestrator\": \"true\"},rate:0,replicas:1,requestsCpu:2000Mi,requestsMemory:100Mi,server:SKLEARN_SERVER,serverThreads:1,serverWorkers:5) run-benchmark-iteration-step-template
│ ├───✔ create-seldon-resource create-seldon-resource-template seldon-benchmark-process-2323867814 1s
│ ├───✔ wait-seldon-resource wait-seldon-resource-template seldon-benchmark-process-2388065488 15s
│ ├─┬─○ run-benchmark-grpc run-benchmark-template-grpc when 'rest == grpc' evaluated false
│ │ └─✔ run-benchmark-rest run-benchmark-template-rest seldon-benchmark-process-3406592537 31s
│ └───✔ delete-seldon-resource delete-seldon-resource-template seldon-benchmark-process-1122797932 3s
├─✔ run-benchmark-iteration(1:apiType:rest,benchmarkCpu:2,concurrency:1,disableOrchestrator:false,duration:30s,image:,limitsCpu:2000Mi,limitsMemory:1000Mi,modelUri:gs://seldon-models/sklearn/iris,name:sklearn-1,params:{\"name\": \"sklearn-1\", \"replicas\": \"1\", \"serverWorkers\": \"5\", \"serverThreads\": \"1\", \"modelUri\": \"gs://seldon-models/sklearn/iris\", \"image\": \"\", \"server\": \"SKLEARN_SERVER\", \"apiType\": \"rest\", \"requestsCpu\": \"2000Mi\", \"requestsMemory\": \"100Mi\", \"limitsCpu\": \"2000Mi\", \"limitsMemory\": \"1000Mi\", \"benchmarkCpu\": \"2\", \"concurrency\": \"1\", \"duration\": \"30s\", \"rate\": \"0\", \"disableOrchestrator\": \"false\"},rate:0,replicas:1,requestsCpu:2000Mi,requestsMemory:100Mi,server:SKLEARN_SERVER,serverThreads:1,serverWorkers:5) run-benchmark-iteration-step-template
│ ├───✔ create-seldon-resource create-seldon-resource-template seldon-benchmark-process-1282498819 2s
│ ├───✔ wait-seldon-resource wait-seldon-resource-template seldon-benchmark-process-634593 17s
│ ├─┬─○ run-benchmark-grpc run-benchmark-template-grpc when 'rest == grpc' evaluated false
│ │ └─✔ run-benchmark-rest run-benchmark-template-rest seldon-benchmark-process-692934928 32s
│ └───✔ delete-seldon-resource delete-seldon-resource-template seldon-benchmark-process-3935684561 2s
├─✔ run-benchmark-iteration(2:apiType:grpc,benchmarkCpu:2,concurrency:1,disableOrchestrator:true,duration:30s,image:,limitsCpu:2000Mi,limitsMemory:1000Mi,modelUri:gs://seldon-models/sklearn/iris,name:sklearn-2,params:{\"name\": \"sklearn-2\", \"replicas\": \"1\", \"serverWorkers\": \"5\", \"serverThreads\": \"1\", \"modelUri\": \"gs://seldon-models/sklearn/iris\", \"image\": \"\", \"server\": \"SKLEARN_SERVER\", \"apiType\": \"grpc\", \"requestsCpu\": \"2000Mi\", \"requestsMemory\": \"100Mi\", \"limitsCpu\": \"2000Mi\", \"limitsMemory\": \"1000Mi\", \"benchmarkCpu\": \"2\", \"concurrency\": \"1\", \"duration\": \"30s\", \"rate\": \"0\", \"disableOrchestrator\": \"true\"},rate:0,replicas:1,requestsCpu:2000Mi,requestsMemory:100Mi,server:SKLEARN_SERVER,serverThreads:1,serverWorkers:5) run-benchmark-iteration-step-template
│ ├───✔ create-seldon-resource create-seldon-resource-template seldon-benchmark-process-637309828 1s
│ ├───✔ wait-seldon-resource wait-seldon-resource-template seldon-benchmark-process-2284480586 19s
│ ├─┬─✔ run-benchmark-grpc run-benchmark-template-grpc seldon-benchmark-process-2580139445 32s
│ │ └─○ run-benchmark-rest run-benchmark-template-rest when 'grpc == rest' evaluated false
│ └───✔ delete-seldon-resource delete-seldon-resource-template seldon-benchmark-process-757645342 3s
└─● run-benchmark-iteration(3:apiType:grpc,benchmarkCpu:2,concurrency:1,disableOrchestrator:false,duration:30s,image:,limitsCpu:2000Mi,limitsMemory:1000Mi,modelUri:gs://seldon-models/sklearn/iris,name:sklearn-3,params:{\"name\": \"sklearn-3\", \"replicas\": \"1\", \"serverWorkers\": \"5\", \"serverThreads\": \"1\", \"modelUri\": \"gs://seldon-models/sklearn/iris\", \"image\": \"\", \"server\": \"SKLEARN_SERVER\", \"apiType\": \"grpc\", \"requestsCpu\": \"2000Mi\", \"requestsMemory\": \"100Mi\", \"limitsCpu\": \"2000Mi\", \"limitsMemory\": \"1000Mi\", \"benchmarkCpu\": \"2\", \"concurrency\": \"1\", \"duration\": \"30s\", \"rate\": \"0\", \"disableOrchestrator\": \"false\"},rate:0,replicas:1,requestsCpu:2000Mi,requestsMemory:100Mi,server:SKLEARN_SERVER,serverThreads:1,serverWorkers:5) run-benchmark-iteration-step-template
├───✔ create-seldon-resource create-seldon-resource-template seldon-benchmark-process-1376808213 1s
└───◷ wait-seldon-resource wait-seldon-resource-template seldon-benchmark-process-3668579423 7s
Process the results¶
We can now print the results in a consumable format.
Deeper Analysis¶
Now that we have all the parameters, we can do a deeper analysis
[12]:
[12]:
True
[ ]:
import sys
sys.path.append("../../../testing/scripts")
import pandas as pd
from seldon_e2e_utils import bench_results_from_output_logs
results = bench_results_from_output_logs("seldon-benchmark-process", namespace="argo")
df = pd.DataFrame.from_dict(results)
[16]:
df.head()
[16]:
| mean | 50th | 90th | 95th | 99th | throughputAchieved | success | errors | name | replicas | ... | apiType | requestsCpu | requestsMemory | limitsCpu | limitsMemory | benchmarkCpu | concurrency | duration | rate | disableOrchestrator | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0 | 4.573302 | 4.018635 | 6.225710 | 7.480878 | 13.893386 | 218.518811 | 6559 | 0 | sklearn-0 | 1 | ... | rest | 2000Mi | 100Mi | 2000Mi | 1000Mi | 2 | 1 | 30s | 0 | true |
| 1 | 4.565145 | 3.939032 | 6.785393 | 7.928704 | 13.315820 | 218.892806 | 6568 | 0 | sklearn-1 | 1 | ... | rest | 2000Mi | 100Mi | 2000Mi | 1000Mi | 2 | 1 | 30s | 0 | false |
| 2 | 3.747319 | 3.212300 | 5.651600 | 6.858700 | 9.191800 | 258.595746 | 7757 | 1 | sklearn-2 | 1 | ... | grpc | 2000Mi | 100Mi | 2000Mi | 1000Mi | 2 | 1 | 30s | 0 | true |
| 3 | 4.271879 | 3.855800 | 6.495800 | 7.353500 | 8.980500 | 226.930063 | 6807 | 1 | sklearn-3 | 1 | ... | grpc | 2000Mi | 100Mi | 2000Mi | 1000Mi | 2 | 1 | 30s | 0 | false |
4 rows × 25 columns
[51]:
!argo delete seldon-benchmark-process -n argo || echo "Argo workflow already deleted or not exists"
Workflow 'seldon-benchmark-process' deleted
[ ]: